Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Gm13453-201ENSMUST00000118708 357 ntBASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scaf1Q5U4C3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Dancr-204ENSMUST00000132389 2347 ntBASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Gm13015-201ENSMUST00000118674 204 ntBASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Gm28630-201ENSMUST00000187806 498 ntBASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scaf1Q5U4C3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scaf1Q5U4C3 Gm10710-201ENSMUST00000047876 3971 ntBASIC19.89■□□□□ 0.78
Scaf1Q5U4C3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Mir7684-201ENSMUST00000183858 60 ntBASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scaf1Q5U4C3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gm13223-201ENSMUST00000118609 747 ntBASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gm27680-201ENSMUST00000184192 160 ntBASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Gm27321-201ENSMUST00000185021 205 ntBASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scaf1Q5U4C3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms