Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Gm17968-201ENSMUST00000194902 784 ntBASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps54Q5SPW0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps54Q5SPW0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.37■□□□□ 0.53
Vps54Q5SPW0 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps54Q5SPW0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Gm10175-201ENSMUST00000086013 645 ntBASIC18.36■□□□□ 0.53
Vps54Q5SPW0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps54Q5SPW0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms