Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm10653-202ENSMUST00000139570 835 ntBASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm8520-201ENSMUST00000186517 868 ntBASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm30025-201ENSMUST00000218555 728 ntBASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms