Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm45841-201ENSMUST00000207700 164 ntBASIC15.04■□□□□ -0
Vps13aQ5H8C4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Gm12176-201ENSMUST00000121420 875 ntBASIC15.04■□□□□ -0
Vps13aQ5H8C4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps13aQ5H8C4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Gm18624-201ENSMUST00000220966 658 ntBASIC15.03■□□□□ -0
Vps13aQ5H8C4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Gm9719-201ENSMUST00000162765 543 ntBASIC15.03■□□□□ -0
Vps13aQ5H8C4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.03■□□□□ -0
Vps13aQ5H8C4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps13aQ5H8C4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps13aQ5H8C4 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps13aQ5H8C4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 App-207ENSMUST00000227737 2827 ntBASIC15.01□□□□□ -0.01
Vps13aQ5H8C4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps13aQ5H8C4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps13aQ5H8C4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps13aQ5H8C4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms