Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Gm14140-201ENSMUST00000119999 995 ntBASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm4Q4VBF2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Gm13597-201ENSMUST00000121239 375 ntBASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
R3hdm4Q4VBF2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
R3hdm4Q4VBF2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Gm18246-201ENSMUST00000221023 728 ntBASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.51■□□□□ 0.23
R3hdm4Q4VBF2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
R3hdm4Q4VBF2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms