Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Nkx6-3Q3UHX8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-3Q3UHX8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-3Q3UHX8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx6-3Q3UHX8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Nkx6-3Q3UHX8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.45□□□□□ -0.1
Nkx6-3Q3UHX8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Gm12008-201ENSMUST00000117791 755 ntBASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx6-3Q3UHX8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Gm25911-201ENSMUST00000157621 56 ntBASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Gm45747-201ENSMUST00000212203 999 ntBASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx6-3Q3UHX8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 325.3 ms