Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.02□□□□□ -0.17
Spg11Q3UHA3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Gm7593-201ENSMUST00000187246 644 ntBASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Spg11Q3UHA3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Gm6756-201ENSMUST00000180647 1620 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 Gm15808-201ENSMUST00000119046 604 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14□□□□□ -0.17
Spg11Q3UHA3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14□□□□□ -0.17
Spg11Q3UHA3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14□□□□□ -0.17
Spg11Q3UHA3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Gm17794-201ENSMUST00000220252 955 ntBASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Spg11Q3UHA3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms