Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Q3U1D9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Q3U1D9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Q3U1D9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.32□□□□□ -0.28
Q3U1D9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.32□□□□□ -0.28
Q3U1D9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.32□□□□□ -0.28
Q3U1D9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.32□□□□□ -0.28
Q3U1D9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Q3U1D9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.31□□□□□ -0.28
Q3U1D9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Q3U1D9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.31□□□□□ -0.28
Q3U1D9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.31□□□□□ -0.28
Q3U1D9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Q3U1D9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Q3U1D9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.31□□□□□ -0.28
Q3U1D9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Q3U1D9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Q3U1D9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.3□□□□□ -0.28
Q3U1D9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Q3U1D9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.3□□□□□ -0.28
Q3U1D9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Gm5177-201ENSMUST00000183092 997 ntBASIC13.3□□□□□ -0.28
Q3U1D9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Thap2-203ENSMUST00000218989 527 ntBASIC13.3□□□□□ -0.28
Q3U1D9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Q3U1D9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Q3U1D9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Q3U1D9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.3□□□□□ -0.28
Q3U1D9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Q3U1D9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms