Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptchd3Q0EEE2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ptchd3Q0EEE2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptchd3Q0EEE2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptchd3Q0EEE2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Gm44430-201ENSMUST00000203376 995 ntBASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms