Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24115-201ENSMUST00000103799 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm22190-201ENSMUST00000103827 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm22191-201ENSMUST00000103831 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24721-201ENSMUST00000103849 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm28018-201ENSMUST00000103869 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm26399-201ENSMUST00000103937 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25349-201ENSMUST00000177728 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm23616-201ENSMUST00000177797 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25871-201ENSMUST00000177816 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24752-201ENSMUST00000178240 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24496-201ENSMUST00000178287 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25649-201ENSMUST00000178476 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25548-201ENSMUST00000178681 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm23147-201ENSMUST00000178841 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm26095-201ENSMUST00000179270 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm22171-201ENSMUST00000179283 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm23936-201ENSMUST00000179354 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm22619-201ENSMUST00000179516 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25255-201ENSMUST00000179579 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24755-201ENSMUST00000179691 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm26506-201ENSMUST00000179692 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm25086-201ENSMUST00000179931 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm23243-201ENSMUST00000180047 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24659-201ENSMUST00000180212 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm24169-201ENSMUST00000180244 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm23689-201ENSMUST00000180354 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm27359-201ENSMUST00000184153 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm27785-201ENSMUST00000184268 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm27466-201ENSMUST00000184396 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm27703-201ENSMUST00000184836 110 ntBASIC13.08□□□□□ -0.32
Col8a1Q00780 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col8a1Q00780 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col8a1Q00780 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Col8a1Q00780 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col8a1Q00780 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col8a1Q00780 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.07□□□□□ -0.32
Col8a1Q00780 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Gm27989-201ENSMUST00000184721 107 ntBASIC13.07□□□□□ -0.32
Col8a1Q00780 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.07□□□□□ -0.32
Col8a1Q00780 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col8a1Q00780 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col8a1Q00780 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Col8a1Q00780 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Col8a1Q00780 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Gm17837-201ENSMUST00000186435 985 ntBASIC13.06□□□□□ -0.32
Col8a1Q00780 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Gm18246-201ENSMUST00000221023 728 ntBASIC13.06□□□□□ -0.32
Col8a1Q00780 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col8a1Q00780 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Col8a1Q00780 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.06□□□□□ -0.32
Col8a1Q00780 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a1Q00780 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a1Q00780 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col8a1Q00780 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a1Q00780 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col8a1Q00780 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col8a1Q00780 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms