Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Gm15808-201ENSMUST00000119046 604 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Gm24526-201ENSMUST00000082921 158 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC10.35□□□□□ -0.75
PrkdcP97313 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.35□□□□□ -0.75
PrkdcP97313 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.35□□□□□ -0.75
PrkdcP97313 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.35□□□□□ -0.75
PrkdcP97313 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PrkdcP97313 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
PrkdcP97313 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.34□□□□□ -0.75
PrkdcP97313 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.34□□□□□ -0.75
PrkdcP97313 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
PrkdcP97313 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
PrkdcP97313 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.34□□□□□ -0.75
PrkdcP97313 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
PrkdcP97313 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PrkdcP97313 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.34□□□□□ -0.75
PrkdcP97313 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PrkdcP97313 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.33□□□□□ -0.76
PrkdcP97313 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.33□□□□□ -0.76
PrkdcP97313 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm22018-201ENSMUST00000104357 131 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Gm16570-201ENSMUST00000161951 436 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.33□□□□□ -0.76
PrkdcP97313 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.33□□□□□ -0.76
PrkdcP97313 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.33□□□□□ -0.76
PrkdcP97313 Gm5354-201ENSMUST00000182417 973 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Gm7399-201ENSMUST00000032395 858 ntBASIC10.33□□□□□ -0.76
PrkdcP97313 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
PrkdcP97313 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PrkdcP97313 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.33□□□□□ -0.76
PrkdcP97313 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PrkdcP97313 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm27572-201ENSMUST00000183702 255 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Gm29127-201ENSMUST00000188304 517 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.32□□□□□ -0.76
PrkdcP97313 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms