Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Gm4899-201ENSMUST00000178708 719 ntBASIC16.67■□□□□ 0.26
Trim43cP86449 AV026068-213ENSMUST00000223675 1171 ntBASIC16.67■□□□□ 0.26
Trim43cP86449 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim43cP86449 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.67■□□□□ 0.26
Trim43cP86449 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trim43cP86449 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim43cP86449 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Trim43cP86449 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim43cP86449 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Gm13036-201ENSMUST00000117799 748 ntBASIC16.66■□□□□ 0.26
Trim43cP86449 Gm12350-201ENSMUST00000121208 462 ntBASIC16.66■□□□□ 0.26
Trim43cP86449 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.66■□□□□ 0.26
Trim43cP86449 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim43cP86449 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Trim43cP86449 Gm27741-201ENSMUST00000185060 237 ntBASIC16.66■□□□□ 0.26
Trim43cP86449 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Trim43cP86449 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim43cP86449 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim43cP86449 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim43cP86449 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim43cP86449 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43cP86449 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim43cP86449 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.66■□□□□ 0.26
Trim43cP86449 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.65■□□□□ 0.26
Trim43cP86449 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim43cP86449 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43cP86449 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43cP86449 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim43cP86449 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.65■□□□□ 0.26
Trim43cP86449 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim43cP86449 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.65■□□□□ 0.26
Trim43cP86449 Gm45167-201ENSMUST00000208007 322 ntBASIC16.65■□□□□ 0.26
Trim43cP86449 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim43cP86449 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim43cP86449 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43cP86449 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim43cP86449 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.64■□□□□ 0.26
Trim43cP86449 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim43cP86449 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim43cP86449 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim43cP86449 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim43cP86449 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Gm10499-201ENSMUST00000174094 934 ntBASIC16.64■□□□□ 0.25
Trim43cP86449 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.64■□□□□ 0.25
Trim43cP86449 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms