Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.39□□□□□ -0.11
Six5P70178 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Six5P70178 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Six5P70178 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Six5P70178 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Six5P70178 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Six5P70178 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.38□□□□□ -0.11
Six5P70178 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.38□□□□□ -0.11
Six5P70178 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Six5P70178 Gm18489-201ENSMUST00000172565 551 ntBASIC14.38□□□□□ -0.11
Six5P70178 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.38□□□□□ -0.11
Six5P70178 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.38□□□□□ -0.11
Six5P70178 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Six5P70178 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.38□□□□□ -0.11
Six5P70178 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Six5P70178 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.38□□□□□ -0.11
Six5P70178 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Gm13884-201ENSMUST00000118103 829 ntBASIC14.37□□□□□ -0.11
Six5P70178 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Gm8318-201ENSMUST00000182954 872 ntBASIC14.37□□□□□ -0.11
Six5P70178 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.37□□□□□ -0.11
Six5P70178 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Six5P70178 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.37□□□□□ -0.11
Six5P70178 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six5P70178 Grk6-207ENSMUST00000225925 2769 ntBASIC14.37□□□□□ -0.11
Six5P70178 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Six5P70178 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Six5P70178 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Six5P70178 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Six5P70178 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.36□□□□□ -0.11
Six5P70178 Gm37153-201ENSMUST00000193637 231 ntBASIC14.36□□□□□ -0.11
Six5P70178 Gm5864-201ENSMUST00000202263 970 ntBASIC14.36□□□□□ -0.11
Six5P70178 Gm18195-201ENSMUST00000207604 706 ntBASIC14.36□□□□□ -0.11
Six5P70178 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Six5P70178 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.36□□□□□ -0.11
Six5P70178 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six5P70178 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms