Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.9■□□□□ 0.3
Hmgb1P63158 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hmgb1P63158 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hmgb1P63158 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb1P63158 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.89■□□□□ 0.3
Hmgb1P63158 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb1P63158 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb1P63158 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Hmgb1P63158 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.89■□□□□ 0.29
Hmgb1P63158 Gm7506-201ENSMUST00000207758 815 ntBASIC16.89■□□□□ 0.29
Hmgb1P63158 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.89■□□□□ 0.29
Hmgb1P63158 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hmgb1P63158 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hmgb1P63158 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.88■□□□□ 0.29
Hmgb1P63158 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Hmgb1P63158 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.88■□□□□ 0.29
Hmgb1P63158 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.88■□□□□ 0.29
Hmgb1P63158 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hmgb1P63158 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hmgb1P63158 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hmgb1P63158 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.87■□□□□ 0.29
Hmgb1P63158 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.87■□□□□ 0.29
Hmgb1P63158 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.87■□□□□ 0.29
Hmgb1P63158 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.87■□□□□ 0.29
Hmgb1P63158 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hmgb1P63158 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms