Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.36□□□□□ -0.43
Lmo4P61969 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Gm16026-204ENSMUST00000162652 683 ntBASIC12.36□□□□□ -0.43
Lmo4P61969 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lmo4P61969 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.36□□□□□ -0.43
Lmo4P61969 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.36□□□□□ -0.43
Lmo4P61969 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lmo4P61969 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Lmo4P61969 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lmo4P61969 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Lmo4P61969 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lmo4P61969 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Lmo4P61969 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Lmo4P61969 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.35□□□□□ -0.43
Lmo4P61969 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.35□□□□□ -0.43
Lmo4P61969 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lmo4P61969 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.35□□□□□ -0.43
Lmo4P61969 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.35□□□□□ -0.43
Lmo4P61969 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lmo4P61969 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lmo4P61969 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Mir449b-201ENSMUST00000104833 80 ntBASIC12.34□□□□□ -0.43
Lmo4P61969 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Gm6973-201ENSMUST00000117080 721 ntBASIC12.34□□□□□ -0.43
Lmo4P61969 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.34□□□□□ -0.43
Lmo4P61969 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Lmo4P61969 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 AA543401-201ENSMUST00000164248 1269 ntBASIC12.34□□□□□ -0.43
Lmo4P61969 Gm25948-201ENSMUST00000175334 112 ntBASIC12.34□□□□□ -0.43
Lmo4P61969 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.34□□□□□ -0.43
Lmo4P61969 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.34□□□□□ -0.43
Lmo4P61969 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lmo4P61969 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lmo4P61969 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lmo4P61969 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lmo4P61969 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lmo4P61969 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lmo4P61969 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms