Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.04□□□□□ -0.48
Ctdsp1P58466 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Gm23547-201ENSMUST00000158210 271 ntBASIC12.03□□□□□ -0.48
Ctdsp1P58466 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Gm6365-201ENSMUST00000054711 744 ntBASIC12.03□□□□□ -0.48
Ctdsp1P58466 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Ctdsp1P58466 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ctdsp1P58466 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ctdsp1P58466 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.02□□□□□ -0.49
Ctdsp1P58466 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.01□□□□□ -0.49
Ctdsp1P58466 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms