Protein–RNA interactions for Protein: P51612

Xpc, DNA repair protein complementing XP-C cells homolog, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XpcP51612 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XpcP51612 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XpcP51612 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
XpcP51612 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
XpcP51612 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
XpcP51612 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.68■□□□□ 0.58
XpcP51612 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
XpcP51612 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.68■□□□□ 0.58
XpcP51612 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Gm27306-201ENSMUST00000183970 107 ntBASIC18.68■□□□□ 0.58
XpcP51612 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.68■□□□□ 0.58
XpcP51612 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.68■□□□□ 0.58
XpcP51612 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.68■□□□□ 0.58
XpcP51612 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.68■□□□□ 0.58
XpcP51612 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
XpcP51612 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
XpcP51612 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.67■□□□□ 0.58
XpcP51612 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.67■□□□□ 0.58
XpcP51612 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
XpcP51612 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Gm25287-201ENSMUST00000103846 110 ntBASIC18.67■□□□□ 0.58
XpcP51612 Gm22918-201ENSMUST00000103855 110 ntBASIC18.67■□□□□ 0.58
XpcP51612 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.67■□□□□ 0.58
XpcP51612 Gm17837-201ENSMUST00000186435 985 ntBASIC18.67■□□□□ 0.58
XpcP51612 Gm38294-201ENSMUST00000192831 381 ntBASIC18.67■□□□□ 0.58
XpcP51612 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.67■□□□□ 0.58
XpcP51612 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.67■□□□□ 0.58
XpcP51612 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.67■□□□□ 0.58
XpcP51612 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
XpcP51612 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
XpcP51612 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XpcP51612 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.66■□□□□ 0.58
XpcP51612 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.66■□□□□ 0.58
XpcP51612 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
XpcP51612 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.66■□□□□ 0.58
XpcP51612 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.66■□□□□ 0.58
XpcP51612 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
XpcP51612 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.66■□□□□ 0.58
XpcP51612 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.66■□□□□ 0.58
XpcP51612 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.66■□□□□ 0.58
XpcP51612 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
XpcP51612 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.66■□□□□ 0.58
XpcP51612 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XpcP51612 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
XpcP51612 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
XpcP51612 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Gm18187-201ENSMUST00000196476 984 ntBASIC18.65■□□□□ 0.58
XpcP51612 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.65■□□□□ 0.58
XpcP51612 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
XpcP51612 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
XpcP51612 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.65■□□□□ 0.58
XpcP51612 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
XpcP51612 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
XpcP51612 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
XpcP51612 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms