Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.75■□□□□ 0.11
Cxcl12P40224 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.75■□□□□ 0.11
Cxcl12P40224 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Gm24694-201ENSMUST00000180054 110 ntBASIC15.75■□□□□ 0.11
Cxcl12P40224 Gm27663-201ENSMUST00000184839 110 ntBASIC15.75■□□□□ 0.11
Cxcl12P40224 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cxcl12P40224 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cxcl12P40224 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cxcl12P40224 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.74■□□□□ 0.11
Cxcl12P40224 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Cxcl12P40224 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.74■□□□□ 0.11
Cxcl12P40224 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.74■□□□□ 0.11
Cxcl12P40224 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.74■□□□□ 0.11
Cxcl12P40224 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.74■□□□□ 0.11
Cxcl12P40224 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.74■□□□□ 0.11
Cxcl12P40224 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cxcl12P40224 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.73■□□□□ 0.11
Cxcl12P40224 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.73■□□□□ 0.11
Cxcl12P40224 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.73■□□□□ 0.11
Cxcl12P40224 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.73■□□□□ 0.11
Cxcl12P40224 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cxcl12P40224 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cxcl12P40224 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Gm18062-201ENSMUST00000208020 547 ntBASIC15.72■□□□□ 0.11
Cxcl12P40224 Gm18055-201ENSMUST00000208254 547 ntBASIC15.72■□□□□ 0.11
Cxcl12P40224 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Gm6180-201ENSMUST00000065243 498 ntBASIC15.72■□□□□ 0.11
Cxcl12P40224 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.72■□□□□ 0.11
Cxcl12P40224 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.72■□□□□ 0.11
Cxcl12P40224 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cxcl12P40224 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cxcl12P40224 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.71■□□□□ 0.11
Cxcl12P40224 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.71■□□□□ 0.11
Cxcl12P40224 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.71■□□□□ 0.11
Cxcl12P40224 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms