Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12□□□□□ -0.49
Ccl6P27784 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12□□□□□ -0.49
Ccl6P27784 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 AC117588.1-201ENSMUST00000228510 999 ntBASIC12□□□□□ -0.49
Ccl6P27784 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12□□□□□ -0.49
Ccl6P27784 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ccl6P27784 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccl6P27784 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccl6P27784 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccl6P27784 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccl6P27784 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccl6P27784 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.99□□□□□ -0.49
Ccl6P27784 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccl6P27784 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ccl6P27784 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Ccl6P27784 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.99□□□□□ -0.49
Ccl6P27784 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ccl6P27784 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccl6P27784 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.98□□□□□ -0.49
Ccl6P27784 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccl6P27784 Gm15372-201ENSMUST00000120729 834 ntBASIC11.98□□□□□ -0.49
Ccl6P27784 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccl6P27784 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccl6P27784 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccl6P27784 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.98□□□□□ -0.49
Ccl6P27784 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Ccl6P27784 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ccl6P27784 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ccl6P27784 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccl6P27784 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms