Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcna1P16388 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Kcna1P16388 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Kcna1P16388 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.38■□□□□ 0.37
Kcna1P16388 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Kcna1P16388 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.38■□□□□ 0.37
Kcna1P16388 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.38■□□□□ 0.37
Kcna1P16388 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.38■□□□□ 0.37
Kcna1P16388 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Gm10175-201ENSMUST00000086013 645 ntBASIC17.38■□□□□ 0.37
Kcna1P16388 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Kcna1P16388 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Kcna1P16388 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Kcna1P16388 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Kcna1P16388 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcna1P16388 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.37■□□□□ 0.37
Kcna1P16388 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.37■□□□□ 0.37
Kcna1P16388 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
Kcna1P16388 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Kcna1P16388 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Kcna1P16388 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcna1P16388 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Kcna1P16388 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.36■□□□□ 0.37
Kcna1P16388 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.36■□□□□ 0.37
Kcna1P16388 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.36■□□□□ 0.37
Kcna1P16388 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.36■□□□□ 0.37
Kcna1P16388 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.36■□□□□ 0.37
Kcna1P16388 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 BC037039-201ENSMUST00000192003 2205 ntBASIC17.36■□□□□ 0.37
Kcna1P16388 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Kcna1P16388 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Kcna1P16388 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Kcna1P16388 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Kcna1P16388 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 Gm25911-201ENSMUST00000157621 56 ntBASIC17.35■□□□□ 0.37
Kcna1P16388 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.35■□□□□ 0.37
Kcna1P16388 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Kcna1P16388 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Kcna1P16388 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms