Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rb1P13405 Gm36967-201ENSMUST00000193814 266 ntBASIC15.72■□□□□ 0.11
Rb1P13405 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.72■□□□□ 0.11
Rb1P13405 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.72■□□□□ 0.11
Rb1P13405 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rb1P13405 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Rb1P13405 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rb1P13405 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.71■□□□□ 0.11
Rb1P13405 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.71■□□□□ 0.11
Rb1P13405 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.71■□□□□ 0.11
Rb1P13405 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rb1P13405 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rb1P13405 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rb1P13405 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rb1P13405 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.7■□□□□ 0.1
Rb1P13405 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.7■□□□□ 0.1
Rb1P13405 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.7■□□□□ 0.1
Rb1P13405 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Rb1P13405 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rb1P13405 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rb1P13405 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rb1P13405 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Gm11764-201ENSMUST00000120221 623 ntBASIC15.69■□□□□ 0.1
Rb1P13405 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.69■□□□□ 0.1
Rb1P13405 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.69■□□□□ 0.1
Rb1P13405 Mir8117-201ENSMUST00000184773 107 ntBASIC15.69■□□□□ 0.1
Rb1P13405 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.69■□□□□ 0.1
Rb1P13405 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Rb1P13405 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rb1P13405 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.69■□□□□ 0.1
Rb1P13405 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rb1P13405 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rb1P13405 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.68■□□□□ 0.1
Rb1P13405 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rb1P13405 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rb1P13405 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Rb1P13405 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms