Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sod1P08228 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sod1P08228 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.35□□□□□ -0.11
Sod1P08228 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sod1P08228 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sod1P08228 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Sod1P08228 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Sod1P08228 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.35□□□□□ -0.11
Sod1P08228 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.35□□□□□ -0.11
Sod1P08228 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.35□□□□□ -0.11
Sod1P08228 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Sod1P08228 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sod1P08228 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sod1P08228 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Sod1P08228 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sod1P08228 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sod1P08228 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Sod1P08228 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.34□□□□□ -0.11
Sod1P08228 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.34□□□□□ -0.11
Sod1P08228 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sod1P08228 Mir6977-201ENSMUST00000184960 64 ntBASIC14.34□□□□□ -0.11
Sod1P08228 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Sod1P08228 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Gm18049-201ENSMUST00000208909 581 ntBASIC14.34□□□□□ -0.11
Sod1P08228 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.34□□□□□ -0.11
Sod1P08228 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.34□□□□□ -0.11
Sod1P08228 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.34□□□□□ -0.11
Sod1P08228 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.34□□□□□ -0.11
Sod1P08228 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sod1P08228 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sod1P08228 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sod1P08228 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sod1P08228 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sod1P08228 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.33□□□□□ -0.12
Sod1P08228 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.33□□□□□ -0.12
Sod1P08228 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Sod1P08228 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Gm27437-201ENSMUST00000183429 107 ntBASIC14.33□□□□□ -0.12
Sod1P08228 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.33□□□□□ -0.12
Sod1P08228 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.33□□□□□ -0.12
Sod1P08228 Gm5186-201ENSMUST00000218781 920 ntBASIC14.33□□□□□ -0.12
Sod1P08228 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sod1P08228 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sod1P08228 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sod1P08228 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sod1P08228 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sod1P08228 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sod1P08228 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sod1P08228 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms