Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.12□□□□□ -0.15
Col4a2P08122 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.12□□□□□ -0.15
Col4a2P08122 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Col4a2P08122 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Gm7653-201ENSMUST00000214567 508 ntBASIC14.12□□□□□ -0.15
Col4a2P08122 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col4a2P08122 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.12□□□□□ -0.15
Col4a2P08122 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col4a2P08122 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
Col4a2P08122 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col4a2P08122 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm7488-201ENSMUST00000117148 684 ntBASIC14.11□□□□□ -0.15
Col4a2P08122 Gm14767-201ENSMUST00000121559 586 ntBASIC14.11□□□□□ -0.15
Col4a2P08122 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.11□□□□□ -0.15
Col4a2P08122 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Gm7775-201ENSMUST00000218871 853 ntBASIC14.11□□□□□ -0.15
Col4a2P08122 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Col4a2P08122 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.11□□□□□ -0.15
Col4a2P08122 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col4a2P08122 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col4a2P08122 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.1□□□□□ -0.15
Col4a2P08122 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a2P08122 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col4a2P08122 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.1□□□□□ -0.15
Col4a2P08122 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.1□□□□□ -0.15
Col4a2P08122 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Col4a2P08122 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col4a2P08122 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col4a2P08122 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.09□□□□□ -0.15
Col4a2P08122 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col4a2P08122 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
Col4a2P08122 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col4a2P08122 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Col4a2P08122 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.09□□□□□ -0.15
Col4a2P08122 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.09□□□□□ -0.15
Col4a2P08122 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms