Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.67□□□□□ -0.22
P06344 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.67□□□□□ -0.22
P06344 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
P06344 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.67□□□□□ -0.22
P06344 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P06344 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
P06344 Gm11779-201ENSMUST00000118541 368 ntBASIC13.67□□□□□ -0.22
P06344 Gm12260-201ENSMUST00000122447 411 ntBASIC13.67□□□□□ -0.22
P06344 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
P06344 Gm4899-201ENSMUST00000178708 719 ntBASIC13.67□□□□□ -0.22
P06344 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.67□□□□□ -0.22
P06344 Gm8000-201ENSMUST00000188378 592 ntBASIC13.67□□□□□ -0.22
P06344 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Gm7787-201ENSMUST00000216858 688 ntBASIC13.67□□□□□ -0.22
P06344 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.67□□□□□ -0.22
P06344 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.67□□□□□ -0.22
P06344 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
P06344 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P06344 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
P06344 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P06344 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.66□□□□□ -0.22
P06344 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P06344 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P06344 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.66□□□□□ -0.22
P06344 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.66□□□□□ -0.22
P06344 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P06344 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.66□□□□□ -0.22
P06344 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.66□□□□□ -0.22
P06344 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P06344 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
P06344 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.66□□□□□ -0.22
P06344 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.66□□□□□ -0.22
P06344 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P06344 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06344 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.65□□□□□ -0.22
P06344 Gm9727-201ENSMUST00000161387 555 ntBASIC13.65□□□□□ -0.22
P06344 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.65□□□□□ -0.22
P06344 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.65□□□□□ -0.22
P06344 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.65□□□□□ -0.22
P06344 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.65□□□□□ -0.22
P06344 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.65□□□□□ -0.22
P06344 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.65□□□□□ -0.22
P06344 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.65□□□□□ -0.22
P06344 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P06344 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06344 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms