Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.51□□□□□ -0.25
P04224 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.51□□□□□ -0.25
P04224 Gm44450-201ENSMUST00000199528 114 ntBASIC13.51□□□□□ -0.25
P04224 Gm18421-201ENSMUST00000204122 625 ntBASIC13.51□□□□□ -0.25
P04224 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P04224 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
P04224 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P04224 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P04224 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P04224 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.51□□□□□ -0.25
P04224 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04224 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.5□□□□□ -0.25
P04224 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
P04224 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P04224 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.5□□□□□ -0.25
P04224 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.5□□□□□ -0.25
P04224 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.5□□□□□ -0.25
P04224 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.5□□□□□ -0.25
P04224 Gm7370-201ENSMUST00000219471 767 ntBASIC13.5□□□□□ -0.25
P04224 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
P04224 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04224 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
P04224 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
P04224 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P04224 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
P04224 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
P04224 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.49□□□□□ -0.25
P04224 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.49□□□□□ -0.25
P04224 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.49□□□□□ -0.25
P04224 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.49□□□□□ -0.25
P04224 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
P04224 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.49□□□□□ -0.25
P04224 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.49□□□□□ -0.25
P04224 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
P04224 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P04224 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P04224 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
P04224 Gm5417-201ENSMUST00000079706 384 ntBASIC13.48□□□□□ -0.25
P04224 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms