Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Igh-VJ558P01758 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Igh-VJ558P01758 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Igh-VJ558P01758 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Gm5682-201ENSMUST00000173402 505 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Gm17971-201ENSMUST00000190239 806 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Gm10819-201ENSMUST00000099988 561 ntBASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Igh-VJ558P01758 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Celf4-206ENSMUST00000224553 1729 ntBASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Gm18489-201ENSMUST00000172565 551 ntBASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Rps4l-201ENSMUST00000071745 943 ntBASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Igh-VJ558P01758 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Igh-VJ558P01758 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms