Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Gm33142-201ENSMUST00000193913 867 ntBASIC13.68□□□□□ -0.22
Slc28a2O88627 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.68□□□□□ -0.22
Slc28a2O88627 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.68□□□□□ -0.22
Slc28a2O88627 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.68□□□□□ -0.22
Slc28a2O88627 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Slc28a2O88627 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc28a2O88627 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc28a2O88627 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.67□□□□□ -0.22
Slc28a2O88627 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Slc28a2O88627 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc28a2O88627 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm14859-201ENSMUST00000117752 357 ntBASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm13312-201ENSMUST00000119631 718 ntBASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm7284-201ENSMUST00000131667 944 ntBASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm27704-201ENSMUST00000185094 107 ntBASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc28a2O88627 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc28a2O88627 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc28a2O88627 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Slc28a2O88627 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc28a2O88627 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc28a2O88627 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms