Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cops4O88544 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Cops4O88544 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops4O88544 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.21□□□□□ -0.13
Cops4O88544 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cops4O88544 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cops4O88544 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cops4O88544 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.2□□□□□ -0.14
Cops4O88544 Gm12134-201ENSMUST00000122109 520 ntBASIC14.2□□□□□ -0.14
Cops4O88544 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.2□□□□□ -0.14
Cops4O88544 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops4O88544 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cops4O88544 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.19□□□□□ -0.14
Cops4O88544 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cops4O88544 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.19□□□□□ -0.14
Cops4O88544 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.19□□□□□ -0.14
Cops4O88544 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cops4O88544 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Cops4O88544 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cops4O88544 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.19□□□□□ -0.14
Cops4O88544 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops4O88544 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.19□□□□□ -0.14
Cops4O88544 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.18□□□□□ -0.14
Cops4O88544 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cops4O88544 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Cops4O88544 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.18□□□□□ -0.14
Cops4O88544 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.18□□□□□ -0.14
Cops4O88544 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.18□□□□□ -0.14
Cops4O88544 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.18□□□□□ -0.14
Cops4O88544 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Gm37722-201ENSMUST00000193757 208 ntBASIC14.18□□□□□ -0.14
Cops4O88544 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cops4O88544 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cops4O88544 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops4O88544 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cops4O88544 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cops4O88544 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms