Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pknox1O70477 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pknox1O70477 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pknox1O70477 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pknox1O70477 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.28■□□□□ 0.04
Pknox1O70477 Gm27704-201ENSMUST00000185094 107 ntBASIC15.28■□□□□ 0.04
Pknox1O70477 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.28■□□□□ 0.04
Pknox1O70477 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.28■□□□□ 0.04
Pknox1O70477 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.28■□□□□ 0.04
Pknox1O70477 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pknox1O70477 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pknox1O70477 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.28■□□□□ 0.04
Pknox1O70477 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pknox1O70477 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pknox1O70477 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.27■□□□□ 0.04
Pknox1O70477 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.27■□□□□ 0.04
Pknox1O70477 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pknox1O70477 Gm19164-201ENSMUST00000210667 640 ntBASIC15.27■□□□□ 0.04
Pknox1O70477 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.27■□□□□ 0.04
Pknox1O70477 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pknox1O70477 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Pknox1O70477 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pknox1O70477 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pknox1O70477 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.27■□□□□ 0.03
Pknox1O70477 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.26■□□□□ 0.03
Pknox1O70477 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Gm25745-201ENSMUST00000174945 133 ntBASIC15.26■□□□□ 0.03
Pknox1O70477 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.26■□□□□ 0.03
Pknox1O70477 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pknox1O70477 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pknox1O70477 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pknox1O70477 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pknox1O70477 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pknox1O70477 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.25■□□□□ 0.03
Pknox1O70477 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms