Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 AW822252-206ENSMUST00000208904 237 ntBASIC18.69■□□□□ 0.58
Mmp8O70138 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Mmp8O70138 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp8O70138 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp8O70138 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mmp8O70138 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp8O70138 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
Mmp8O70138 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Mmp8O70138 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp8O70138 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Mmp8O70138 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mmp8O70138 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.68■□□□□ 0.58
Mmp8O70138 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp8O70138 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Mmp8O70138 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.67■□□□□ 0.58
Mmp8O70138 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp8O70138 Gm5364-201ENSMUST00000216789 889 ntBASIC18.67■□□□□ 0.58
Mmp8O70138 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mmp8O70138 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp8O70138 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp8O70138 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp8O70138 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.66■□□□□ 0.58
Mmp8O70138 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp8O70138 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.66■□□□□ 0.58
Mmp8O70138 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.66■□□□□ 0.58
Mmp8O70138 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp8O70138 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Mmp8O70138 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Mmp8O70138 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.65■□□□□ 0.58
Mmp8O70138 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp8O70138 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp8O70138 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms