Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm7222-201ENSMUST00000117512 906 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm27646-201ENSMUST00000183989 110 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm19164-201ENSMUST00000210667 640 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm15590-201ENSMUST00000078419 552 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.45□□□□□ -0.58
Rpl35aO55142 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Rpl35aO55142 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl35aO55142 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.44□□□□□ -0.58
Rpl35aO55142 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Gm18206-201ENSMUST00000207027 926 ntBASIC11.44□□□□□ -0.58
Rpl35aO55142 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rpl35aO55142 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.44□□□□□ -0.58
Rpl35aO55142 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.44□□□□□ -0.58
Rpl35aO55142 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl35aO55142 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.43□□□□□ -0.58
Rpl35aO55142 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.43□□□□□ -0.58
Rpl35aO55142 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Gm6443-201ENSMUST00000203599 874 ntBASIC11.43□□□□□ -0.58
Rpl35aO55142 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.43□□□□□ -0.58
Rpl35aO55142 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rpl35aO55142 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.43□□□□□ -0.58
Rpl35aO55142 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms