Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.25□□□□□ -0.13
BckdkO55028 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
BckdkO55028 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BckdkO55028 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.25□□□□□ -0.13
BckdkO55028 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.25□□□□□ -0.13
BckdkO55028 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
BckdkO55028 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.24□□□□□ -0.13
BckdkO55028 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
BckdkO55028 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
BckdkO55028 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Gm12350-201ENSMUST00000121208 462 ntBASIC14.24□□□□□ -0.13
BckdkO55028 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.24□□□□□ -0.13
BckdkO55028 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.24□□□□□ -0.13
BckdkO55028 Mir5126-201ENSMUST00000175513 77 ntBASIC14.24□□□□□ -0.13
BckdkO55028 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.24□□□□□ -0.13
BckdkO55028 Mir6404-201ENSMUST00000183699 94 ntBASIC14.24□□□□□ -0.13
BckdkO55028 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.24□□□□□ -0.13
BckdkO55028 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
BckdkO55028 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BckdkO55028 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
BckdkO55028 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BckdkO55028 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.24□□□□□ -0.13
BckdkO55028 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BckdkO55028 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
BckdkO55028 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.23□□□□□ -0.13
BckdkO55028 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BckdkO55028 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BckdkO55028 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
BckdkO55028 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
BckdkO55028 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
BckdkO55028 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gm15173-201ENSMUST00000122049 433 ntBASIC14.22□□□□□ -0.13
BckdkO55028 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.22□□□□□ -0.13
BckdkO55028 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BckdkO55028 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
BckdkO55028 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.22□□□□□ -0.13
BckdkO55028 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms