Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.99□□□□□ -0.01
Npc1O35604 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.99□□□□□ -0.01
Npc1O35604 AW822252-206ENSMUST00000208904 237 ntBASIC14.99□□□□□ -0.01
Npc1O35604 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.99□□□□□ -0.01
Npc1O35604 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Npc1O35604 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.99□□□□□ -0.01
Npc1O35604 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Npc1O35604 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Npc1O35604 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.98□□□□□ -0.01
Npc1O35604 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.98□□□□□ -0.01
Npc1O35604 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Npc1O35604 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Npc1O35604 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Npc1O35604 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Npc1O35604 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gm18489-201ENSMUST00000172565 551 ntBASIC14.97□□□□□ -0.01
Npc1O35604 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.97□□□□□ -0.01
Npc1O35604 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.97□□□□□ -0.01
Npc1O35604 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.97□□□□□ -0.01
Npc1O35604 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.97□□□□□ -0.01
Npc1O35604 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Npc1O35604 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Npc1O35604 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Npc1O35604 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Npc1O35604 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Npc1O35604 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Npc1O35604 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Npc1O35604 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.96□□□□□ -0.01
Npc1O35604 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.96□□□□□ -0.01
Npc1O35604 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.96□□□□□ -0.01
Npc1O35604 Gm7787-201ENSMUST00000216858 688 ntBASIC14.96□□□□□ -0.01
Npc1O35604 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.96□□□□□ -0.01
Npc1O35604 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.96□□□□□ -0.01
Npc1O35604 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Npc1O35604 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms