Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sgo2bJ3QMK1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Gm15358-201ENSMUST00000119249 520 ntBASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sgo2bJ3QMK1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Gm17971-201ENSMUST00000190239 806 ntBASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
Sgo2bJ3QMK1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.3■□□□□ 0.04
Sgo2bJ3QMK1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sgo2bJ3QMK1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms