Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Mir7684-201ENSMUST00000183858 60 ntBASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Gm27306-201ENSMUST00000183970 107 ntBASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcf11G3X9Z4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Pcf11G3X9Z4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC23■■□□□ 1.27
Pcf11G3X9Z4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcf11G3X9Z4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Tcf21-202ENSMUST00000218002 1788 ntBASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Gm5479-201ENSMUST00000160578 435 ntBASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Gm9719-201ENSMUST00000162765 543 ntBASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Mxra8os-201ENSMUST00000097740 687 ntBASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcf11G3X9Z4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm27437-201ENSMUST00000183429 107 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm29310-201ENSMUST00000185468 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21825-201ENSMUST00000185728 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm29109-201ENSMUST00000185895 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21896-201ENSMUST00000186520 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21873-201ENSMUST00000186728 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21794-201ENSMUST00000187056 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21880-201ENSMUST00000187275 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21826-201ENSMUST00000187451 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21198-201ENSMUST00000188393 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21749-201ENSMUST00000189343 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21901-201ENSMUST00000189568 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm29424-201ENSMUST00000189716 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm28599-201ENSMUST00000189838 694 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21867-201ENSMUST00000189917 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm29269-201ENSMUST00000190087 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21722-201ENSMUST00000190153 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm28423-201ENSMUST00000190701 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21899-201ENSMUST00000190745 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21910-201ENSMUST00000191163 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21849-201ENSMUST00000191571 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm28678-201ENSMUST00000191593 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm20910-201ENSMUST00000193268 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Gm21871-201ENSMUST00000194621 696 ntBASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcf11G3X9Z4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Gm42466-201ENSMUST00000202099 1301 ntBASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcf11G3X9Z4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Gm15487-201ENSMUST00000122373 465 ntBASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 AC158529.1-201ENSMUST00000223618 239 ntBASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcf11G3X9Z4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms