Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raph1F2Z3U3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Gm30025-201ENSMUST00000218555 728 ntBASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raph1F2Z3U3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Mir1668-201ENSMUST00000184114 107 ntBASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Raph1F2Z3U3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Gm10052-201ENSMUST00000168019 960 ntBASIC15.28■□□□□ 0.04
Raph1F2Z3U3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms