Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Gm44492-201ENSMUST00000197012 141 ntBASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb9E9Q5G2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 H2af-ps-201ENSMUST00000119066 295 ntBASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb9E9Q5G2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb9E9Q5G2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb9E9Q5G2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms