Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm9229-201ENSMUST00000222777 126 ntBASIC8.46□□□□□ -1.05
Herc1E9PZP8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Herc1E9PZP8 Gm18584-201ENSMUST00000203098 964 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm18935-201ENSMUST00000212692 664 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm44364-201ENSMUST00000198368 141 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm43818-201ENSMUST00000200605 466 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm16177-201ENSMUST00000120728 718 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 AC133598.1-201ENSMUST00000224327 660 ntBASIC8.46□□□□□ -1.06
Herc1E9PZP8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Herc1E9PZP8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm14381-201ENSMUST00000122105 414 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm29396-201ENSMUST00000185659 716 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm16476-201ENSMUST00000221544 139 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 CT025551.1-201ENSMUST00000223996 692 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 AC154680.1-201ENSMUST00000224376 859 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Trav13-3-201ENSMUST00000117226 336 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Herc1E9PZP8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC8.45□□□□□ -1.06
Herc1E9PZP8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms