Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.92■□□□□ 0.46
Usp42B2RQC2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.92■□□□□ 0.46
Usp42B2RQC2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.92■□□□□ 0.46
Usp42B2RQC2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp42B2RQC2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gm18246-201ENSMUST00000221023 728 ntBASIC17.91■□□□□ 0.46
Usp42B2RQC2 Psmb5-202ENSMUST00000227257 622 ntBASIC17.91■□□□□ 0.46
Usp42B2RQC2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.91■□□□□ 0.46
Usp42B2RQC2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp42B2RQC2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Celf4-206ENSMUST00000224553 1729 ntBASIC17.9■□□□□ 0.46
Usp42B2RQC2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Gm1401-201ENSMUST00000122048 772 ntBASIC17.9■□□□□ 0.46
Usp42B2RQC2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.9■□□□□ 0.46
Usp42B2RQC2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp42B2RQC2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.9■□□□□ 0.46
Usp42B2RQC2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.89■□□□□ 0.46
Usp42B2RQC2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.89■□□□□ 0.45
Usp42B2RQC2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.89■□□□□ 0.45
Usp42B2RQC2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp42B2RQC2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp42B2RQC2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms