Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.03□□□□□ -0.16
CtcflA2APF3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.03□□□□□ -0.16
CtcflA2APF3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.03□□□□□ -0.16
CtcflA2APF3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtcflA2APF3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
CtcflA2APF3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.02□□□□□ -0.16
CtcflA2APF3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CtcflA2APF3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CtcflA2APF3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CtcflA2APF3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.02□□□□□ -0.16
CtcflA2APF3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtcflA2APF3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CtcflA2APF3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.02□□□□□ -0.17
CtcflA2APF3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CtcflA2APF3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtcflA2APF3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CtcflA2APF3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Gm7638-201ENSMUST00000121348 967 ntBASIC14.01□□□□□ -0.17
CtcflA2APF3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtcflA2APF3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CtcflA2APF3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.01□□□□□ -0.17
CtcflA2APF3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtcflA2APF3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtcflA2APF3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtcflA2APF3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CtcflA2APF3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CtcflA2APF3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CtcflA2APF3 Ankra2-208ENSMUST00000226100 1476 ntBASIC14□□□□□ -0.17
CtcflA2APF3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtcflA2APF3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtcflA2APF3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtcflA2APF3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14□□□□□ -0.17
CtcflA2APF3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtcflA2APF3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CtcflA2APF3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms