Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm8825-201ENSMUST00000182565 998 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm4518-201ENSMUST00000182638 718 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-1A0N8R0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Gm10013-201ENSMUST00000106074 672 ntBASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Gm9172-201ENSMUST00000212092 954 ntBASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-1A0N8R0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-1A0N8R0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms