Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 BC037039-201ENSMUST00000192003 2205 ntBASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lnp1A0A1B0GSK3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm27459-201ENSMUST00000184860 107 ntBASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm19164-201ENSMUST00000210667 640 ntBASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Birc2-201ENSMUST00000054878 378 ntBASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lnp1A0A1B0GSK3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm8344-201ENSMUST00000119813 856 ntBASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lnp1A0A1B0GSK3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lnp1A0A1B0GSK3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms