Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Gm19164-201ENSMUST00000210667 640 ntBASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc194A0A140LIT1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Gm25745-201ENSMUST00000174945 133 ntBASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Gm27704-201ENSMUST00000185094 107 ntBASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc194A0A140LIT1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc194A0A140LIT1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Gm14722-201ENSMUST00000118943 689 ntBASIC15.27■□□□□ 0.04
Ccdc194A0A140LIT1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms