Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-4A0A075B6B4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Gm7222-201ENSMUST00000117512 906 ntBASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-4A0A075B6B4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm15173-201ENSMUST00000122049 433 ntBASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm7230-201ENSMUST00000173026 815 ntBASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-4A0A075B6B4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms