Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6d-7A0A075B6B0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trav6d-7A0A075B6B0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6d-7A0A075B6B0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6d-7A0A075B6B0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Birc2-201ENSMUST00000054878 378 ntBASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-7A0A075B6B0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm13312-201ENSMUST00000119631 718 ntBASIC11.87□□□□□ -0.51
Trav6d-7A0A075B6B0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms