Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm7290-201ENSMUST00000104990 617 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm12918-201ENSMUST00000120234 636 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm15710-201ENSMUST00000121821 636 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm5075-201ENSMUST00000196916 622 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm6365-201ENSMUST00000054711 744 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-4A0A075B654 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Gm5297-201ENSMUST00000198555 1171 ntBASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-4A0A075B654 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms