Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5-1A0A075B5Z7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm2756-201ENSMUST00000195851 400 ntBASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5-1A0A075B5Z7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms