Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Speer3W4VSP1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Speer3W4VSP1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Speer3W4VSP1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Speer3W4VSP1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Speer3W4VSP1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Speer3W4VSP1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Gm6345-202ENSMUST00000180900 204 ntBASIC15.7■□□□□ 0.1
Speer3W4VSP1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.7■□□□□ 0.1
Speer3W4VSP1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Speer3W4VSP1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.69■□□□□ 0.1
Speer3W4VSP1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm14859-201ENSMUST00000117752 357 ntBASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Speer3W4VSP1 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.68■□□□□ 0.1
Speer3W4VSP1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Speer3W4VSP1 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.68■□□□□ 0.1
Speer3W4VSP1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.68■□□□□ 0.1
Speer3W4VSP1 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Speer3W4VSP1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms