Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
H2afb3S4R1G7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H2afb3S4R1G7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm8825-201ENSMUST00000182565 998 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm4518-201ENSMUST00000182638 718 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm44454-201ENSMUST00000198541 138 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm9172-201ENSMUST00000212092 954 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H2afb3S4R1G7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
H2afb3S4R1G7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms