Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.99□□□□□ -0.49
CcsQ9WU84 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Mir1668-201ENSMUST00000184114 107 ntBASIC11.99□□□□□ -0.49
CcsQ9WU84 Gm7370-201ENSMUST00000219471 767 ntBASIC11.99□□□□□ -0.49
CcsQ9WU84 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CcsQ9WU84 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.99□□□□□ -0.49
CcsQ9WU84 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CcsQ9WU84 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CcsQ9WU84 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.98□□□□□ -0.49
CcsQ9WU84 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gm22697-201ENSMUST00000175194 63 ntBASIC11.98□□□□□ -0.49
CcsQ9WU84 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CcsQ9WU84 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CcsQ9WU84 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms